mzx package¶

Submodules¶

mzx.cli module¶

mzx.cli.main()[source]¶

Module contents¶

mzx.convert_raw_file(params: TConfig) → str[source]¶: Convert the raw file to mzML format based on the vendor.

mzx.format_function_number(s)[source]¶

mzx.modify_waters_scan_header(line)[source]¶: Modify the Waters scan header line.

mzx.msconvert(params)[source]¶: Converts the given file to the mzML format using the msconvert tool.

mzx.process_waters_scan_headers(file_path)[source]¶: Process the Waters scan headers in the given file.

mzx.run_cmd(cmd)[source]¶: Run a command and return the output.

mzx.waters_convert(file, two_pass=False)[source]¶: Convert Waters raw file to mzML format.